BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G07LP1|AL430436
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1044 0.0
>3x_Contig1677
Length = 15081
Score = 1044 bits (521), Expect = 0.0
Identities = 669/705 (94%), Gaps = 19/705 (2%)
Strand = Plus / Plus
Query: 249 tttgatttgattygataatttgtattcaaaaaatgggaattccyataaatctggagagtt 308
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8494 tttgatttgatttgataatttgtattcaaaaaatgggaattcctataaatctggagagtt 8553
Query: 309 tggaagtaacccgtgtgtaccaagcgtacgattttgwtggtaggtccgggctgggacgcc 368
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 8554 tggaagtaacccgtgtgtaccaagcgtacgattttgatggtaggtccgggctgggacgcc 8613
Query: 369 gcagaagcagtaacactgctacgggaacagtcttgtgagttcgagaggaactgatcgata 428
||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| || |
Sbjct: 8614 gcagaagcagttacactgca--gggaacagtcttgtgagttcgagaggaac-gat-ga-a 8668
Query: 429 tggctgctgttgacgcgtacggaaaatcgagacgcatcaattgcgtgtggggattkagat 488
||| || |||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 8669 tgg-tg-tgttgacg-gtacggaaaatcgagacgcatcaattgcgtgtggggattgagat 8725
Query: 489 gaactctgcttcggctgcgaaggattctattggtcactctggcgataacgcaaggttctc 548
|||||||||||||| || |||||||| | |||| ||||||| ||||| |||||||||||
Sbjct: 8726 gaactctgcttcgg-tg-gaaggatttt--tggt-actctgg-gataa-gcaaggttctc 8778
Query: 549 agatagtcgtgattkctccgtttggagacgtgttcagtgtcataatagttgcacgggggc 608
|||||||||||||| |||||||||||||||| |||||||| ||||| |||| ||||||||
Sbjct: 8779 agatagtcgtgatttctccgtttggagacgt-ttcagtgt-ataat-gttg-acgggggc 8834
Query: 609 atatcaccgcgtaacgagctagttagagtggcacggatttcatggaacgagtttttgttc 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8835 atatcaccgcgtaacgagctagttagagtggcacggatttcatggaacgagtttttgttc 8894
Query: 669 atgggccaktcagatgcagtatattttgggaacgctcacgacggtggtgttcgtcatgat 728
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 8895 atgggccattcagatgcagtttattttgggaacgctcacgacggtggtgttcgtcatgat 8954
Query: 729 tactgggatgtgggtgccaytagtacgatgtggcatatacctraggatgasascttctgt 788
||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||||||
Sbjct: 8955 tactgggatgtgggtgccattagtacgatgtggcatatacctaaggatgacaccttctgt 9014
Query: 789 tgcgtgctascagacggtattgcacatgtcactgagaatccaagaagaacgttacggaga 848
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9015 tgcgtgctaccagacggtattgcacatgtcactgagaatccaagaagaacgttacggaga 9074
Query: 849 cggrcttctttggatgacgagaatttggaatcaagacaaatgacgcattacatacaagat 908
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9075 cggacttctttggatgacgagaatttggaatcaagacaaatgacgcattacatacaagat 9134
Query: 909 tactcgatcatcgagccatgccckgctaaggatgctctagcgata 953
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9135 tactcgatcatcgagccatgccctgctaaggatgctctagcgata 9179
Score = 266 bits (133), Expect = 4e-71
Identities = 148/151 (98%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 1 gatctgatttatyaattggcatagtaaaatcacagattataaagatttttattaatctgg 60
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8271 gatctgatttat-aattggcatagtaaaatcacag-ttataaagatttttattaatctgg 8328
Query: 61 ggtatttaaaagcaaacagttttttataaagaacaaaactctttatggaacagaatttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8329 ggtatttaaaagcaaacagttttttataaagaacaaaactctttatggaacagaatttgg 8388
Query: 121 atatcaaactgttacagtyttgttaggtatt 151
|||||||||||||||||| ||||||||||||
Sbjct: 8389 atatcaaactgttacagttttgttaggtatt 8419
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4918
Number of Sequences: 1807
Number of extensions: 4918
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)